BiRD bioinformatics Hub

BiRD develops bioinformatics tools and data analysis pipelines

The pipelines are orchestrated with the SnakeMake workflow management system, hosted on the Nantes University GitLab platform and indexed in the European Bio.tools registry.

Software
SRP Pipeline logo

SRP Pipeline

Snakemake pipeline for 3'SRP data analysis
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RNASeq Pipeline logo

RNASeq Pipeline

Snakemake pipeline for RNASeq data analysis
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FAIR Checker logo

FAIR Checker

Tool aimed at assessing FAIR principles and empowering data provider to enhance the quality of their digital resources
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MicroSysmics logo

MicroSysmics

Snakemake pipeline for microbiome metabarcoding analysis
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PyBravo logo

PyBravo

Biological network assembly
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MiBiOmics logo

MiBiOmics

Shiny-based web application for correlation network and multi-omics analysis
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MAGNETO logo

MAGNETO

Automated Workflow for Genome-Resolved Metagenomics
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BiRD bioinformatics Hub
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